What aspects are important to you?
Everything will eventually cycle back to this statement in the second post.
Asking what "The Best" ignition system is... Is too use case dependent.
It is like asking what "The Best" aircraft is. First you will have to specify what you really need it to do.
Does your ignition system need to ignite boosted mixture at 9000rpm in a V12? Then you probably DO want to step away from the distributor and go to individual coils.
Each coil is now going to cost what the 1 distributed coil costs. You will absolutely need an engine management system to figure out when to charge and fire them, etc.
Does your ignition system need to ignite mixture in a single engine piston powered aircraft?
Reliability is now almost your only criteria. If you even have just 1 ignition system, it is probably magnetos, much like your lawnmower.
Even if we agree that we are mostly only talking about low revving, naturally aspirated, probably carbureted, antique inline sixes, that are far from stretching the limits of traditional distributor ignitions, what do you value most here?
Are you willing to live with the wear maintenance of points for authenticity sake? Did you modify it to the point that it idles like a mortar mixer? Maybe even just because you like the way that sounds? CDI is now your best friend....