Not that I am an expert, by any means, but I have had quite a bit of experience with the H/W 32/36 and now the 38.
Before you start to tune the Webers correctly, you HAVE to make sure that the idle is turned down low enough that you are not exposing the primary port at idle. In other words, if the idle is turned too high, you are not running through the idle port alone, but also through the primary port. If you are trying to tune it this way, you will never get it set right no matter how you jet it or fiddle with the mixture screws. The symptoms will be rough idle and stalling in gear because you will be running overly rich.
Trust me on this one. This is where most people seem to have their problems... It sure was part of mine.
Verify if you are running rich or lean.
To see if you are lean, partially cover up the top of the carb. This is limiting the amount of air into the carb. If this makes it run better, you are running too lean. To see if you are too rich, create a vacuum leak below the carb. That is adding additional air to the mixture. If that causes it to run better, you are too rich.